Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sox6P40645 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sox6P40645 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Gm11803-201ENSMUST00000119966 444 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Gm10156-201ENSMUST00000122364 462 ntBASIC11.75□□□□□ -0.53
Sox6P40645 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox6P40645 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Gm8810-201ENSMUST00000172895 754 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Gm24196-201ENSMUST00000179161 110 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.75□□□□□ -0.53
Sox6P40645 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox6P40645 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sox6P40645 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.74□□□□□ -0.53
Sox6P40645 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.74□□□□□ -0.53
Sox6P40645 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox6P40645 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 Gm6458-201ENSMUST00000211573 635 ntBASIC11.74□□□□□ -0.53
Sox6P40645 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Gm10012-201ENSMUST00000078252 192 ntBASIC11.74□□□□□ -0.53
Sox6P40645 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.74□□□□□ -0.53
Sox6P40645 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox6P40645 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox6P40645 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox6P40645 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox6P40645 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.73□□□□□ -0.53
Sox6P40645 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox6P40645 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms