Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.1□□□□□ -0.47
TfamP40630 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TfamP40630 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.1□□□□□ -0.47
TfamP40630 Gm19184-201ENSMUST00000196798 928 ntBASIC12.1□□□□□ -0.47
TfamP40630 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TfamP40630 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.1□□□□□ -0.47
TfamP40630 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TfamP40630 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.09□□□□□ -0.47
TfamP40630 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TfamP40630 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.09□□□□□ -0.47
TfamP40630 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.09□□□□□ -0.47
TfamP40630 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.09□□□□□ -0.47
TfamP40630 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.09□□□□□ -0.47
TfamP40630 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.09□□□□□ -0.47
TfamP40630 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.09□□□□□ -0.47
TfamP40630 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.09□□□□□ -0.47
TfamP40630 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
TfamP40630 Gm5035-201ENSMUST00000215581 927 ntBASIC12.09□□□□□ -0.47
TfamP40630 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.09□□□□□ -0.47
TfamP40630 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.09□□□□□ -0.47
TfamP40630 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Gm6091-201ENSMUST00000098307 165 ntBASIC12.09□□□□□ -0.47
TfamP40630 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TfamP40630 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.09□□□□□ -0.47
TfamP40630 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.09□□□□□ -0.47
TfamP40630 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TfamP40630 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.09□□□□□ -0.47
TfamP40630 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TfamP40630 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.09□□□□□ -0.47
TfamP40630 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.08□□□□□ -0.47
TfamP40630 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
TfamP40630 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.08□□□□□ -0.48
TfamP40630 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 Gm7029-201ENSMUST00000173226 450 ntBASIC12.08□□□□□ -0.48
TfamP40630 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Gm29649-201ENSMUST00000185649 419 ntBASIC12.08□□□□□ -0.48
TfamP40630 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.08□□□□□ -0.48
TfamP40630 Gm7561-201ENSMUST00000211203 886 ntBASIC12.08□□□□□ -0.48
TfamP40630 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.08□□□□□ -0.48
TfamP40630 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
TfamP40630 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.08□□□□□ -0.48
TfamP40630 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TfamP40630 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.08□□□□□ -0.48
TfamP40630 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TfamP40630 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TfamP40630 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TfamP40630 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms