Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.82□□□□□ -0.36
Cxcl12P40224 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cxcl12P40224 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cxcl12P40224 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm26286-201ENSMUST00000104166 134 ntBASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm11949-201ENSMUST00000117640 372 ntBASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm15352-201ENSMUST00000118696 270 ntBASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm43186-201ENSMUST00000198130 824 ntBASIC12.81□□□□□ -0.36
Cxcl12P40224 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.81□□□□□ -0.36
Cxcl12P40224 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.81□□□□□ -0.36
Cxcl12P40224 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cxcl12P40224 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cxcl12P40224 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm16071-201ENSMUST00000119589 793 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm15566-201ENSMUST00000121130 590 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm13263-201ENSMUST00000121271 838 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm17826-201ENSMUST00000189720 798 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm43520-201ENSMUST00000197996 164 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm7902-201ENSMUST00000198842 947 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm25201-201ENSMUST00000083093 170 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm8325-201ENSMUST00000099086 453 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.8□□□□□ -0.36
Cxcl12P40224 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cxcl12P40224 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cxcl12P40224 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cxcl12P40224 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.79□□□□□ -0.36
Cxcl12P40224 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms