Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.44□□□□□ -0.42
LdlrP35951 Gm3961-201ENSMUST00000204425 994 ntBASIC12.44□□□□□ -0.42
LdlrP35951 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LdlrP35951 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.44□□□□□ -0.42
LdlrP35951 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LdlrP35951 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.44□□□□□ -0.42
LdlrP35951 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LdlrP35951 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LdlrP35951 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.43□□□□□ -0.42
LdlrP35951 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LdlrP35951 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LdlrP35951 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.43□□□□□ -0.42
LdlrP35951 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
LdlrP35951 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Mir8109-201ENSMUST00000184375 117 ntBASIC12.43□□□□□ -0.42
LdlrP35951 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Gm38241-201ENSMUST00000192641 898 ntBASIC12.43□□□□□ -0.42
LdlrP35951 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.43□□□□□ -0.42
LdlrP35951 Gm45880-201ENSMUST00000213041 853 ntBASIC12.43□□□□□ -0.42
LdlrP35951 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.43□□□□□ -0.42
LdlrP35951 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LdlrP35951 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.43□□□□□ -0.42
LdlrP35951 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LdlrP35951 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.43□□□□□ -0.42
LdlrP35951 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.42□□□□□ -0.42
LdlrP35951 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.42□□□□□ -0.42
LdlrP35951 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Gm8213-201ENSMUST00000118191 441 ntBASIC12.42□□□□□ -0.42
LdlrP35951 Gm14704-201ENSMUST00000120300 874 ntBASIC12.42□□□□□ -0.42
LdlrP35951 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.42□□□□□ -0.42
LdlrP35951 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Proscos-202ENSMUST00000178990 666 ntBASIC12.42□□□□□ -0.42
LdlrP35951 Gm27331-201ENSMUST00000183705 60 ntBASIC12.42□□□□□ -0.42
LdlrP35951 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.42□□□□□ -0.42
LdlrP35951 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Gm8227-201ENSMUST00000223306 571 ntBASIC12.42□□□□□ -0.42
LdlrP35951 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.42□□□□□ -0.42
LdlrP35951 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LdlrP35951 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms