Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Thbs1P35441 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Thbs1P35441 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Thbs1P35441 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.61□□□□□ -0.55
Thbs1P35441 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Thbs1P35441 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
Thbs1P35441 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Gm27390-201ENSMUST00000184516 176 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Gm27731-201ENSMUST00000185192 107 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.6□□□□□ -0.55
Thbs1P35441 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Thbs1P35441 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Thbs1P35441 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Thbs1P35441 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
Thbs1P35441 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Thbs1P35441 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Thbs1P35441 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Gm18595-201ENSMUST00000175736 1068 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Thbs1P35441 Gm37293-201ENSMUST00000191658 295 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.59□□□□□ -0.55
Thbs1P35441 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Thbs1P35441 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Thbs1P35441 Gm24136-201ENSMUST00000083374 165 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Thbs1P35441 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.59□□□□□ -0.55
Thbs1P35441 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Thbs1P35441 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Thbs1P35441 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.59□□□□□ -0.55
Thbs1P35441 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms