Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gm22133-201ENSMUST00000102082 109 ntBASIC11.53□□□□□ -0.56
Sftpa1P35242 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.53□□□□□ -0.56
Sftpa1P35242 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gm17827-201ENSMUST00000211825 742 ntBASIC11.53□□□□□ -0.56
Sftpa1P35242 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gm19994-201ENSMUST00000217086 586 ntBASIC11.53□□□□□ -0.56
Sftpa1P35242 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.53□□□□□ -0.56
Sftpa1P35242 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Ginm1-202ENSMUST00000065124 300 ntBASIC11.53□□□□□ -0.56
Sftpa1P35242 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.53□□□□□ -0.56
Sftpa1P35242 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sftpa1P35242 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.53□□□□□ -0.56
Sftpa1P35242 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.52□□□□□ -0.56
Sftpa1P35242 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.52□□□□□ -0.56
Sftpa1P35242 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Sftpa1P35242 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sftpa1P35242 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Sftpa1P35242 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sftpa1P35242 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm6407-201ENSMUST00000176468 549 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm5733-201ENSMUST00000190232 939 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm38210-201ENSMUST00000191944 809 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm43962-201ENSMUST00000203898 190 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.52□□□□□ -0.57
Sftpa1P35242 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sftpa1P35242 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.52□□□□□ -0.57
Sftpa1P35242 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms