Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.79□□□□□ -0.36
Mmp13P33435 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.79□□□□□ -0.36
Mmp13P33435 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.79□□□□□ -0.36
Mmp13P33435 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.79□□□□□ -0.36
Mmp13P33435 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Mmp13P33435 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Mmp13P33435 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Mmp13P33435 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.79□□□□□ -0.36
Mmp13P33435 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.79□□□□□ -0.36
Mmp13P33435 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.79□□□□□ -0.36
Mmp13P33435 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Mmp13P33435 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Mmp13P33435 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 Paupar-201ENSMUST00000194826 3482 ntBASIC12.79□□□□□ -0.36
Mmp13P33435 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Mmp13P33435 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Mmp13P33435 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.79□□□□□ -0.36
Mmp13P33435 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Mmp13P33435 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Mmp13P33435 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Mmp13P33435 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.78□□□□□ -0.36
Mmp13P33435 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Mmp13P33435 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Mmp13P33435 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Gm2231-201ENSMUST00000125661 612 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Gm26185-201ENSMUST00000157692 266 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.78□□□□□ -0.36
Mmp13P33435 Gm5370-201ENSMUST00000187187 574 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Gm10268-201ENSMUST00000085340 555 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Mmp13P33435 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.78□□□□□ -0.36
Mmp13P33435 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Mmp13P33435 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.77□□□□□ -0.36
Mmp13P33435 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.77□□□□□ -0.36
Mmp13P33435 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.77□□□□□ -0.36
Mmp13P33435 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Mmp13P33435 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Mmp13P33435 Gm14704-201ENSMUST00000120300 874 ntBASIC12.77□□□□□ -0.37
Mmp13P33435 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Mmp13P33435 Gm27390-201ENSMUST00000184516 176 ntBASIC12.77□□□□□ -0.37
Mmp13P33435 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.77□□□□□ -0.37
Mmp13P33435 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Mmp13P33435 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms