Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Slc6a1P31648 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.76□□□□□ -0.69
Slc6a1P31648 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.76□□□□□ -0.69
Slc6a1P31648 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Gm11478-201ENSMUST00000117851 599 ntBASIC10.76□□□□□ -0.69
Slc6a1P31648 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.76□□□□□ -0.69
Slc6a1P31648 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.76□□□□□ -0.69
Slc6a1P31648 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Slc6a1P31648 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Slc6a1P31648 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Slc6a1P31648 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.75□□□□□ -0.69
Slc6a1P31648 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.75□□□□□ -0.69
Slc6a1P31648 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.75□□□□□ -0.69
Slc6a1P31648 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.75□□□□□ -0.69
Slc6a1P31648 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Gm18905-201ENSMUST00000205454 928 ntBASIC10.75□□□□□ -0.69
Slc6a1P31648 Gm18624-201ENSMUST00000220966 658 ntBASIC10.75□□□□□ -0.69
Slc6a1P31648 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.75□□□□□ -0.69
Slc6a1P31648 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Slc6a1P31648 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Slc6a1P31648 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms