Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.57□□□□□ -0.56
Cd40lgP27548 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.57□□□□□ -0.56
Cd40lgP27548 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.57□□□□□ -0.56
Cd40lgP27548 Gm13392-201ENSMUST00000117708 150 ntBASIC11.57□□□□□ -0.56
Cd40lgP27548 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.57□□□□□ -0.56
Cd40lgP27548 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Gm42693-201ENSMUST00000196779 631 ntBASIC11.57□□□□□ -0.56
Cd40lgP27548 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Snora73a-201ENSMUST00000082453 205 ntBASIC11.57□□□□□ -0.56
Cd40lgP27548 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cd40lgP27548 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cd40lgP27548 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.56□□□□□ -0.56
Cd40lgP27548 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.56□□□□□ -0.56
Cd40lgP27548 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.56□□□□□ -0.56
Cd40lgP27548 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.56□□□□□ -0.56
Cd40lgP27548 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.56□□□□□ -0.56
Cd40lgP27548 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.56□□□□□ -0.56
Cd40lgP27548 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cd40lgP27548 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cd40lgP27548 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cd40lgP27548 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.55□□□□□ -0.56
Cd40lgP27548 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms