Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm26110-201ENSMUST00000083971 165 ntBASIC10.42□□□□□ -0.74
Col8a2P25318 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Col8a2P25318 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.42□□□□□ -0.74
Col8a2P25318 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.42□□□□□ -0.74
Col8a2P25318 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Col8a2P25318 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Col8a2P25318 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.42□□□□□ -0.74
Col8a2P25318 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Col8a2P25318 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm14208-201ENSMUST00000119645 678 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 Gm12997-201ENSMUST00000120207 640 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 Gm15547-201ENSMUST00000122152 333 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm18304-201ENSMUST00000189162 546 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm18041-201ENSMUST00000218210 618 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Col8a2P25318 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Col8a2P25318 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Col8a2P25318 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Col8a2P25318 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.41□□□□□ -0.74
Col8a2P25318 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Col8a2P25318 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Col8a2P25318 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.4□□□□□ -0.74
Col8a2P25318 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.4□□□□□ -0.74
Col8a2P25318 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Col8a2P25318 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.4□□□□□ -0.74
Col8a2P25318 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Col8a2P25318 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Col8a2P25318 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Col8a2P25318 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Col8a2P25318 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Col8a2P25318 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms