Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm5035-201ENSMUST00000215581 927 ntBASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Tnfrsf1aP25118 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Gm4984-201ENSMUST00000115987 360 ntBASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Tnfrsf1aP25118 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Tnfrsf1aP25118 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Gm12363-201ENSMUST00000122250 668 ntBASIC10.45□□□□□ -0.74
Tnfrsf1aP25118 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms