Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
BdnfP21237 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.01□□□□□ -0.49
BdnfP21237 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.01□□□□□ -0.49
BdnfP21237 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.01□□□□□ -0.49
BdnfP21237 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
BdnfP21237 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
BdnfP21237 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12□□□□□ -0.49
BdnfP21237 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
BdnfP21237 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12□□□□□ -0.49
BdnfP21237 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12□□□□□ -0.49
BdnfP21237 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
BdnfP21237 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
BdnfP21237 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12□□□□□ -0.49
BdnfP21237 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12□□□□□ -0.49
BdnfP21237 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
BdnfP21237 Gm13123-201ENSMUST00000122173 492 ntBASIC12□□□□□ -0.49
BdnfP21237 Gm12138-201ENSMUST00000122180 951 ntBASIC12□□□□□ -0.49
BdnfP21237 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12□□□□□ -0.49
BdnfP21237 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
BdnfP21237 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12□□□□□ -0.49
BdnfP21237 Gm9124-201ENSMUST00000191789 1092 ntBASIC12□□□□□ -0.49
BdnfP21237 Gm9113-201ENSMUST00000192510 1018 ntBASIC12□□□□□ -0.49
BdnfP21237 Gm9131-201ENSMUST00000193557 1089 ntBASIC12□□□□□ -0.49
BdnfP21237 Gm9121-201ENSMUST00000193749 1071 ntBASIC12□□□□□ -0.49
BdnfP21237 Gm19184-201ENSMUST00000196798 928 ntBASIC12□□□□□ -0.49
BdnfP21237 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12□□□□□ -0.49
BdnfP21237 AC154239.3-201ENSMUST00000226933 674 ntBASIC12□□□□□ -0.49
BdnfP21237 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12□□□□□ -0.49
BdnfP21237 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Gm38049-201ENSMUST00000195698 1372 ntBASIC12□□□□□ -0.49
BdnfP21237 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
BdnfP21237 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Gm14608-201ENSMUST00000120030 1553 ntBASIC12□□□□□ -0.49
BdnfP21237 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12□□□□□ -0.49
BdnfP21237 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
BdnfP21237 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
BdnfP21237 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
BdnfP21237 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
BdnfP21237 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
BdnfP21237 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.99□□□□□ -0.49
BdnfP21237 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.99□□□□□ -0.49
BdnfP21237 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
BdnfP21237 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.99□□□□□ -0.49
BdnfP21237 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.99□□□□□ -0.49
BdnfP21237 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.99□□□□□ -0.49
BdnfP21237 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
BdnfP21237 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.99□□□□□ -0.49
BdnfP21237 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
BdnfP21237 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
BdnfP21237 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms