Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Cog3-203ENSMUST00000227473 4197 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm16479-201ENSMUST00000121706 932 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Mir6392-201ENSMUST00000184924 108 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm37922-201ENSMUST00000195596 455 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm44882-201ENSMUST00000205702 802 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm20949-201ENSMUST00000206478 952 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm18624-201ENSMUST00000220966 658 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.4□□□□□ -0.58
Hmgn1P18608 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Gm24136-201ENSMUST00000083374 165 ntBASIC11.4□□□□□ -0.58
Hmgn1P18608 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmgn1P18608 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn1P18608 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn1P18608 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn1P18608 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn1P18608 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.4□□□□□ -0.59
Hmgn1P18608 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn1P18608 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn1P18608 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.4□□□□□ -0.59
Hmgn1P18608 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Snord83b-201ENSMUST00000104546 94 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm8213-201ENSMUST00000118191 441 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm2231-201ENSMUST00000125661 612 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmgn1P18608 Rmrp-201ENSMUST00000157463 271 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm26185-201ENSMUST00000157692 266 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmgn1P18608 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Mir7023-201ENSMUST00000185093 64 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm37917-201ENSMUST00000194711 392 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.39□□□□□ -0.59
Hmgn1P18608 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hmgn1P18608 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hmgn1P18608 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hmgn1P18608 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Hmgn1P18608 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.39□□□□□ -0.59
Hmgn1P18608 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmgn1P18608 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn1P18608 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hmgn1P18608 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn1P18608 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.38□□□□□ -0.59
Hmgn1P18608 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn1P18608 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms