Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Lire1P11260 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.94□□□□□ -0.5
Lire1P11260 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.94□□□□□ -0.5
Lire1P11260 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lire1P11260 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lire1P11260 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lire1P11260 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.94□□□□□ -0.5
Lire1P11260 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lire1P11260 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lire1P11260 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Lire1P11260 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Gm15770-201ENSMUST00000117498 584 ntBASIC11.93□□□□□ -0.5
Lire1P11260 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.93□□□□□ -0.5
Lire1P11260 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.93□□□□□ -0.5
Lire1P11260 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.93□□□□□ -0.5
Lire1P11260 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.93□□□□□ -0.5
Lire1P11260 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.93□□□□□ -0.5
Lire1P11260 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.93□□□□□ -0.5
Lire1P11260 Gm42550-201ENSMUST00000201553 960 ntBASIC11.93□□□□□ -0.5
Lire1P11260 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.93□□□□□ -0.5
Lire1P11260 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.93□□□□□ -0.5
Lire1P11260 Gm7399-201ENSMUST00000032395 858 ntBASIC11.93□□□□□ -0.5
Lire1P11260 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Lire1P11260 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.93□□□□□ -0.5
Lire1P11260 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Lire1P11260 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.92□□□□□ -0.5
Lire1P11260 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.92□□□□□ -0.5
Lire1P11260 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lire1P11260 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.92□□□□□ -0.5
Lire1P11260 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.92□□□□□ -0.5
Lire1P11260 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Lire1P11260 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.92□□□□□ -0.5
Lire1P11260 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.92□□□□□ -0.5
Lire1P11260 Gm22331-201ENSMUST00000158066 136 ntBASIC11.92□□□□□ -0.5
Lire1P11260 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lire1P11260 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms