Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Gm44891-201ENSMUST00000208817 2223 ntBASIC11□□□□□ -0.65
Ccl3P10855 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccl3P10855 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11□□□□□ -0.65
Ccl3P10855 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11□□□□□ -0.65
Ccl3P10855 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Gm42682-201ENSMUST00000198349 1265 ntBASIC11□□□□□ -0.65
Ccl3P10855 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 AC166992.1-201ENSMUST00000216356 565 ntBASIC11□□□□□ -0.65
Ccl3P10855 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Gm26448-201ENSMUST00000082446 203 ntBASIC11□□□□□ -0.65
Ccl3P10855 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11□□□□□ -0.65
Ccl3P10855 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Ccl3P10855 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11□□□□□ -0.65
Ccl3P10855 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11□□□□□ -0.65
Ccl3P10855 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccl3P10855 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl3P10855 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ccl3P10855 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.99□□□□□ -0.65
Ccl3P10855 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccl3P10855 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.99□□□□□ -0.65
Ccl3P10855 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ccl3P10855 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl3P10855 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.99□□□□□ -0.65
Ccl3P10855 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ccl3P10855 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Gm5733-201ENSMUST00000190232 939 ntBASIC10.99□□□□□ -0.65
Ccl3P10855 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.99□□□□□ -0.65
Ccl3P10855 Gm43916-201ENSMUST00000205062 967 ntBASIC10.99□□□□□ -0.65
Ccl3P10855 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Ccl3P10855 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Ccl3P10855 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.99□□□□□ -0.65
Ccl3P10855 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.99□□□□□ -0.65
Ccl3P10855 Ginm1-202ENSMUST00000065124 300 ntBASIC10.99□□□□□ -0.65
Ccl3P10855 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ccl3P10855 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Ccl3P10855 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.99□□□□□ -0.65
Ccl3P10855 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl3P10855 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Ccl3P10855 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.99□□□□□ -0.65
Ccl3P10855 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.99□□□□□ -0.65
Ccl3P10855 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ccl3P10855 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Ccl3P10855 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ccl3P10855 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ccl3P10855 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ccl3P10855 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms