Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Gm45206-201ENSMUST00000206885 2285 ntBASIC8.55□□□□□ -1.04
Smim1P0C8K7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Smim1P0C8K7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm13015-201ENSMUST00000118674 204 ntBASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm6447-201ENSMUST00000118905 835 ntBASIC8.54□□□□□ -1.04
Smim1P0C8K7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm38297-201ENSMUST00000195122 1057 ntBASIC8.54□□□□□ -1.04
Smim1P0C8K7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm18049-201ENSMUST00000208909 581 ntBASIC8.54□□□□□ -1.04
Smim1P0C8K7 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 AC135669.1-202ENSMUST00000216742 540 ntBASIC8.54□□□□□ -1.04
Smim1P0C8K7 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm24447-201ENSMUST00000083977 338 ntBASIC8.54□□□□□ -1.04
Smim1P0C8K7 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm9816-201ENSMUST00000122292 1414 ntBASIC8.54□□□□□ -1.04
Smim1P0C8K7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Smim1P0C8K7 Gm37954-201ENSMUST00000195400 2071 ntBASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm15240-201ENSMUST00000118156 720 ntBASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm11439-201ENSMUST00000118598 409 ntBASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm11978-201ENSMUST00000122315 466 ntBASIC8.53□□□□□ -1.04
Smim1P0C8K7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Gm17807-201ENSMUST00000186869 298 ntBASIC8.53□□□□□ -1.04
Smim1P0C8K7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Smim1P0C8K7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Smim1P0C8K7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms