Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Gm8617-201ENSMUST00000118796 2222 ntBASIC18.54■□□□□ 0.56
NclP09405 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NclP09405 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NclP09405 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
NclP09405 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NclP09405 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.53■□□□□ 0.56
NclP09405 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NclP09405 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Gm7619-201ENSMUST00000210649 1282 ntBASIC18.53■□□□□ 0.56
NclP09405 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC18.53■□□□□ 0.56
NclP09405 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NclP09405 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
NclP09405 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
NclP09405 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
NclP09405 Gm4909-201ENSMUST00000118749 794 ntBASIC18.52■□□□□ 0.56
NclP09405 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC18.52■□□□□ 0.56
NclP09405 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Gm42937-201ENSMUST00000197360 752 ntBASIC18.52■□□□□ 0.56
NclP09405 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC18.52■□□□□ 0.56
NclP09405 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NclP09405 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NclP09405 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NclP09405 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NclP09405 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Gm43858-201ENSMUST00000199418 1778 ntBASIC18.51■□□□□ 0.55
NclP09405 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Gm24231-201ENSMUST00000104315 133 ntBASIC18.51■□□□□ 0.55
NclP09405 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NclP09405 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Gm9022-201ENSMUST00000182482 992 ntBASIC18.51■□□□□ 0.55
NclP09405 Gm32999-201ENSMUST00000192693 562 ntBASIC18.51■□□□□ 0.55
NclP09405 Gm45224-201ENSMUST00000208203 414 ntBASIC18.51■□□□□ 0.55
NclP09405 Aprt-ps-201ENSMUST00000212311 505 ntBASIC18.51■□□□□ 0.55
NclP09405 Gm19208-201ENSMUST00000213861 912 ntBASIC18.51■□□□□ 0.55
NclP09405 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC18.51■□□□□ 0.55
NclP09405 Gm8385-201ENSMUST00000058999 643 ntBASIC18.51■□□□□ 0.55
NclP09405 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Ntrk2-208ENSMUST00000225583 2719 ntBASIC18.51■□□□□ 0.55
NclP09405 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NclP09405 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NclP09405 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NclP09405 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC18.5■□□□□ 0.55
NclP09405 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NclP09405 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NclP09405 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms