Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim1O70400 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pdlim1O70400 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.38□□□□□ -0.43
Pdlim1O70400 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim1O70400 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdlim1O70400 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.37□□□□□ -0.43
Pdlim1O70400 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Gm23119-201ENSMUST00000158610 140 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 Gm39404-201ENSMUST00000216350 313 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.37□□□□□ -0.43
Pdlim1O70400 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim1O70400 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdlim1O70400 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm11531-201ENSMUST00000117614 555 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm25043-201ENSMUST00000158604 212 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm44958-201ENSMUST00000203734 736 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm3961-201ENSMUST00000204425 994 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm45331-201ENSMUST00000209868 554 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Map1b-203ENSMUST00000223725 2669 ntBASIC12.36□□□□□ -0.43
Pdlim1O70400 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.36□□□□□ -0.43
Pdlim1O70400 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim1O70400 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms