Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Copb2O55029 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Copb2O55029 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Gm6963-201ENSMUST00000147879 379 ntBASIC14.36□□□□□ -0.11
Copb2O55029 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.36□□□□□ -0.11
Copb2O55029 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.36□□□□□ -0.11
Copb2O55029 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Copb2O55029 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Copb2O55029 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Copb2O55029 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Copb2O55029 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.35□□□□□ -0.11
Copb2O55029 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.35□□□□□ -0.11
Copb2O55029 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Copb2O55029 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Gm24231-201ENSMUST00000104315 133 ntBASIC14.35□□□□□ -0.11
Copb2O55029 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Copb2O55029 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.35□□□□□ -0.11
Copb2O55029 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Copb2O55029 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Copb2O55029 Gm18304-201ENSMUST00000189162 546 ntBASIC14.35□□□□□ -0.11
Copb2O55029 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.35□□□□□ -0.11
Copb2O55029 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.35□□□□□ -0.11
Copb2O55029 Gm8385-201ENSMUST00000058999 643 ntBASIC14.35□□□□□ -0.11
Copb2O55029 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Copb2O55029 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Copb2O55029 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Copb2O55029 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Copb2O55029 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.34□□□□□ -0.11
Copb2O55029 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.34□□□□□ -0.11
Copb2O55029 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Gm13296-201ENSMUST00000117854 997 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.34□□□□□ -0.11
Copb2O55029 Rprl1-202ENSMUST00000198476 238 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Gm8913-201ENSMUST00000209491 641 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Copb2O55029 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.34□□□□□ -0.11
Copb2O55029 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.34□□□□□ -0.11
Copb2O55029 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.34□□□□□ -0.11
Copb2O55029 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Copb2O55029 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Copb2O55029 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.34□□□□□ -0.11
Copb2O55029 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Copb2O55029 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms