Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf13O54965 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf13O54965 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.31□□□□□ -0.6
Rnf13O54965 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.31□□□□□ -0.6
Rnf13O54965 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf13O54965 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf13O54965 Gm2423-201ENSMUST00000074863 733 ntBASIC11.31□□□□□ -0.6
Rnf13O54965 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf13O54965 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf13O54965 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.31□□□□□ -0.6
Rnf13O54965 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.31□□□□□ -0.6
Rnf13O54965 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf13O54965 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf13O54965 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Rnf13O54965 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm13123-201ENSMUST00000122173 492 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.3□□□□□ -0.6
Rnf13O54965 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm23363-201ENSMUST00000175024 79 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm2495-201ENSMUST00000191160 466 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm38671-201ENSMUST00000200573 130 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf13O54965 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf13O54965 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf13O54965 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf13O54965 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.3□□□□□ -0.6
Rnf13O54965 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf13O54965 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.29□□□□□ -0.6
Rnf13O54965 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf13O54965 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.29□□□□□ -0.6
Rnf13O54965 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf13O54965 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms