Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc188F6WEU2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Gm15620-201ENSMUST00000122949 270 ntBASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc188F6WEU2 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc188F6WEU2 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Gm13204-201ENSMUST00000120110 821 ntBASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Gm18776-201ENSMUST00000188833 654 ntBASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Gm37782-201ENSMUST00000194879 678 ntBASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc188F6WEU2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Gm19931-201ENSMUST00000198920 368 ntBASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc188F6WEU2 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms