Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 Gm15207-201ENSMUST00000119259 442 ntBASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 Gm24078-201ENSMUST00000158184 103 ntBASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 Gm37981-201ENSMUST00000194280 535 ntBASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 AC114645.1-201ENSMUST00000215831 187 ntBASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 AC154759.1-201ENSMUST00000224137 1159 ntBASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Col22a1E9Q7P1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Gm38344-201ENSMUST00000195306 1353 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Grk6-205ENSMUST00000224653 2976 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Gm12179-201ENSMUST00000118344 1272 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Gm13445-201ENSMUST00000121664 307 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Gm25677-201ENSMUST00000174983 72 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Gm19015-201ENSMUST00000184002 1189 ntBASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Col22a1E9Q7P1 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm13624-201ENSMUST00000120263 462 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm12164-201ENSMUST00000121695 551 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm2345-201ENSMUST00000193451 589 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Gm6423-201ENSMUST00000204315 934 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Rps3a2-201ENSMUST00000074245 792 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Rps3a3-201ENSMUST00000074680 795 ntBASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col22a1E9Q7P1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col22a1E9Q7P1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm23604-201ENSMUST00000104311 132 ntBASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm14270-201ENSMUST00000118388 846 ntBASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm15004-201ENSMUST00000119192 630 ntBASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm22379-201ENSMUST00000157480 131 ntBASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm39288-201ENSMUST00000210554 446 ntBASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Olfr584-201ENSMUST00000098210 964 ntBASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col22a1E9Q7P1 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms