Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm6722-201ENSMUST00000221586 390 ntBASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Gm25201-201ENSMUST00000083093 170 ntBASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Gm43807-201ENSMUST00000200678 1781 ntBASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.25■□□□□ 0.35
Hfm1D3Z4R1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Gm43692-201ENSMUST00000198236 1062 ntBASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 AC113082.1-201ENSMUST00000217324 327 ntBASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Hfm1D3Z4R1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Gm25063-201ENSMUST00000104666 94 ntBASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Gm17798-201ENSMUST00000182282 1035 ntBASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Mir6407-201ENSMUST00000184510 101 ntBASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Gm44552-201ENSMUST00000205458 1247 ntBASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 AC136376.2-201ENSMUST00000228819 490 ntBASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hfm1D3Z4R1 Gm10176-201ENSMUST00000159707 2264 ntBASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Ighv2-1-201ENSMUST00000170946 353 ntBASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Gm4735-201ENSMUST00000138679 1302 ntBASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Gm5855-201ENSMUST00000200240 1305 ntBASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Gm5380-201ENSMUST00000119296 2136 ntBASIC17.22■□□□□ 0.35
Hfm1D3Z4R1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms