Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Gm9192-201ENSMUST00000183221 985 ntBASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Gm8342-201ENSMUST00000209839 757 ntBASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a6B1AVK5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Col4a6B1AVK5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.58□□□□□ -0.39
Col4a6B1AVK5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Col4a6B1AVK5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col4a6B1AVK5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Gm13182-201ENSMUST00000122241 312 ntBASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.58□□□□□ -0.4
Col4a6B1AVK5 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Col4a6B1AVK5 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.57□□□□□ -0.4
Col4a6B1AVK5 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm5451-201ENSMUST00000080545 579 ntBASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col4a6B1AVK5 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms