Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scn3aA2ASI5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm5706-201ENSMUST00000181525 993 ntBASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm8285-201ENSMUST00000208293 759 ntBASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm23912-201ENSMUST00000104687 87 ntBASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm7851-201ENSMUST00000117574 323 ntBASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm17391-201ENSMUST00000171036 126 ntBASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn3aA2ASI5 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm1821-202ENSMUST00000227415 750 ntBASIC13.79□□□□□ -0.2
Scn3aA2ASI5 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn3aA2ASI5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.79□□□□□ -0.2
Scn3aA2ASI5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Gm8100-201ENSMUST00000182906 988 ntBASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Gm7467-201ENSMUST00000185173 652 ntBASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Mir7686-201ENSMUST00000200604 57 ntBASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Gm44126-201ENSMUST00000204831 514 ntBASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Scn3aA2ASI5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms