Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm14928-201ENSMUST00000120198 477 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm16342-201ENSMUST00000124025 1025 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm23984-201ENSMUST00000157139 203 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm6983-201ENSMUST00000214912 628 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 AC238811.3-201ENSMUST00000225422 709 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav6n-6A0A075B6B2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm15429-201ENSMUST00000151268 798 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm44397-201ENSMUST00000195950 113 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm9794-201ENSMUST00000202370 423 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm45841-201ENSMUST00000207700 164 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm17794-201ENSMUST00000220252 955 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav6n-6A0A075B6B2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms