Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm12138-201ENSMUST00000122180 951 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Mir1894-201ENSMUST00000122802 81 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm16296-201ENSMUST00000159905 325 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm8652-201ENSMUST00000181363 964 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm32025-201ENSMUST00000217960 307 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.24□□□□□ -0.77
Trav18A0A075B656 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav18A0A075B656 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm22331-201ENSMUST00000158066 136 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm10012-201ENSMUST00000078252 192 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav18A0A075B656 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav18A0A075B656 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.23□□□□□ -0.77
Trav18A0A075B656 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav18A0A075B656 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms