Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm17794-201ENSMUST00000220252 955 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Mir339-201ENSMUST00000083659 96 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav5-4A0A075B652 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Gm12203-201ENSMUST00000118235 598 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Gm12209-201ENSMUST00000120089 596 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Gm14704-201ENSMUST00000120300 874 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Gm16479-201ENSMUST00000121706 932 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Gm27892-201ENSMUST00000185017 106 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav5-4A0A075B652 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav5-4A0A075B652 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms