Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.8□□□□□ -0.52
Trim3Q9R1R2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Gm26185-201ENSMUST00000157692 266 ntBASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim3Q9R1R2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Mir1938-201ENSMUST00000158746 100 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm25927-201ENSMUST00000175058 117 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm42693-201ENSMUST00000196779 631 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm4768-201ENSMUST00000206199 686 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Gm19163-201ENSMUST00000223313 780 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim3Q9R1R2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms