Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm18584-201ENSMUST00000203098 964 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Gm37424-201ENSMUST00000191727 561 ntBASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prpf40aQ9R1C7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm12742-201ENSMUST00000117326 410 ntBASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm11591-201ENSMUST00000120063 702 ntBASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms