Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Gm11637-201ENSMUST00000120601 592 ntBASIC11.15□□□□□ -0.62
Nubp2Q9R061 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.15□□□□□ -0.62
Nubp2Q9R061 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Gm19184-201ENSMUST00000196798 928 ntBASIC11.15□□□□□ -0.62
Nubp2Q9R061 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.15□□□□□ -0.62
Nubp2Q9R061 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.15□□□□□ -0.62
Nubp2Q9R061 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nubp2Q9R061 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.15□□□□□ -0.63
Nubp2Q9R061 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Nubp2Q9R061 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Nubp2Q9R061 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nubp2Q9R061 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Nubp2Q9R061 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.14□□□□□ -0.63
Nubp2Q9R061 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.14□□□□□ -0.63
Nubp2Q9R061 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm37008-201ENSMUST00000195712 319 ntBASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm45331-201ENSMUST00000209868 554 ntBASIC11.14□□□□□ -0.63
Nubp2Q9R061 Gm45880-201ENSMUST00000213041 853 ntBASIC11.14□□□□□ -0.63
Nubp2Q9R061 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.14□□□□□ -0.63
Nubp2Q9R061 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Nubp2Q9R061 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nubp2Q9R061 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nubp2Q9R061 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nubp2Q9R061 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Nubp2Q9R061 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nubp2Q9R061 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Nubp2Q9R061 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms