Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rnf4Q9QZS2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf4Q9QZS2 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf4Q9QZS2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms