Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Hmgn5Q9JL35 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Gm11594-201ENSMUST00000122313 162 ntBASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Gm28760-201ENSMUST00000185995 736 ntBASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Gm44397-201ENSMUST00000195950 113 ntBASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgn5Q9JL35 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Gm6983-201ENSMUST00000214912 628 ntBASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn5Q9JL35 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms