Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trem1Q9JKE2 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gm9824-201ENSMUST00000178707 561 ntBASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gm33320-201ENSMUST00000192232 530 ntBASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.18□□□□□ -0.62
Trem1Q9JKE2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.18□□□□□ -0.62
Trem1Q9JKE2 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trem1Q9JKE2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Gm15460-201ENSMUST00000118147 391 ntBASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Gm21470-201ENSMUST00000187680 696 ntBASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.17□□□□□ -0.62
Trem1Q9JKE2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Gm13385-201ENSMUST00000121089 220 ntBASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Mir1897-201ENSMUST00000122581 272 ntBASIC11.16□□□□□ -0.62
Trem1Q9JKE2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms