Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm13036-201ENSMUST00000117799 748 ntBASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm6539-201ENSMUST00000119157 1064 ntBASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm13597-201ENSMUST00000121239 375 ntBASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smco4Q9JIS3 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Rgr-203ENSMUST00000225070 4704 ntBASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Smco4Q9JIS3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm6222-201ENSMUST00000120787 396 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm29310-201ENSMUST00000185468 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21825-201ENSMUST00000185728 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm29109-201ENSMUST00000185895 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21896-201ENSMUST00000186520 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21873-201ENSMUST00000186728 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21794-201ENSMUST00000187056 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21880-201ENSMUST00000187275 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21826-201ENSMUST00000187451 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21198-201ENSMUST00000188393 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21749-201ENSMUST00000189343 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21901-201ENSMUST00000189568 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm29424-201ENSMUST00000189716 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm28599-201ENSMUST00000189838 694 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21867-201ENSMUST00000189917 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm29269-201ENSMUST00000190087 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21722-201ENSMUST00000190153 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm28423-201ENSMUST00000190701 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21899-201ENSMUST00000190745 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21910-201ENSMUST00000191163 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21849-201ENSMUST00000191571 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm28678-201ENSMUST00000191593 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm20910-201ENSMUST00000193268 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm21871-201ENSMUST00000194621 696 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm18669-201ENSMUST00000216049 778 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Smco4Q9JIS3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms