Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
ClpxQ9JHS4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClpxQ9JHS4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gm6447-201ENSMUST00000118905 835 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gm27390-201ENSMUST00000184516 176 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gm44397-201ENSMUST00000195950 113 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClpxQ9JHS4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpxQ9JHS4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpxQ9JHS4 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClpxQ9JHS4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClpxQ9JHS4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms