Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm11801-201ENSMUST00000117807 746 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm6485-201ENSMUST00000160676 439 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm28686-201ENSMUST00000187404 609 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gm4157-201ENSMUST00000211647 679 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx2-4Q9EQM3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm11509-201ENSMUST00000117358 325 ntBASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Mir1956-201ENSMUST00000157748 65 ntBASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm44329-201ENSMUST00000197469 112 ntBASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx2-4Q9EQM3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Gm13600-201ENSMUST00000117949 744 ntBASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Gm22877-201ENSMUST00000175451 105 ntBASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Gm37299-201ENSMUST00000193951 826 ntBASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.79□□□□□ -0.36
Nkx2-4Q9EQM3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nkx2-4Q9EQM3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms