Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm14704-201ENSMUST00000120300 874 ntBASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm13786-201ENSMUST00000122371 333 ntBASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm6621-201ENSMUST00000193251 772 ntBASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cdc40Q9DC48 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cdc40Q9DC48 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cdc40Q9DC48 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.65□□□□□ -0.55
Cdc40Q9DC48 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdc40Q9DC48 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Cdc40Q9DC48 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdc40Q9DC48 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm12502-201ENSMUST00000120197 444 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm8738-201ENSMUST00000172606 329 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm22121-201ENSMUST00000175148 54 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm38158-201ENSMUST00000194617 339 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm8227-201ENSMUST00000223306 571 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdc40Q9DC48 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms