Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Gm9229-201ENSMUST00000222777 126 ntBASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Hmg20aQ9DC33 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Gm15693-201ENSMUST00000120470 637 ntBASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Gm26035-201ENSMUST00000083065 308 ntBASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Btrc-209ENSMUST00000224478 2194 ntBASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Hmg20aQ9DC33 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm15393-201ENSMUST00000120499 219 ntBASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm38294-201ENSMUST00000192831 381 ntBASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hmg20aQ9DC33 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms