Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
U2af1Q9D883 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
U2af1Q9D883 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.43■□□□□ 0.22
U2af1Q9D883 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.42■□□□□ 0.22
U2af1Q9D883 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
U2af1Q9D883 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm24830-201ENSMUST00000102024 166 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm9083-201ENSMUST00000120423 819 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.42■□□□□ 0.22
U2af1Q9D883 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm25890-201ENSMUST00000177643 165 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm22614-201ENSMUST00000178300 165 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 AA914427-201ENSMUST00000193194 1166 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm38317-201ENSMUST00000195564 343 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 AC169036.1-201ENSMUST00000227994 296 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm10312-201ENSMUST00000078515 489 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm22042-201ENSMUST00000082989 165 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm26232-201ENSMUST00000083360 166 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm24136-201ENSMUST00000083374 165 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Gm26110-201ENSMUST00000083971 165 ntBASIC16.42■□□□□ 0.22
U2af1Q9D883 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
U2af1Q9D883 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
U2af1Q9D883 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.41■□□□□ 0.22
U2af1Q9D883 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.41■□□□□ 0.22
U2af1Q9D883 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.41■□□□□ 0.22
U2af1Q9D883 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Gm23119-201ENSMUST00000158610 140 ntBASIC16.41■□□□□ 0.22
U2af1Q9D883 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.41■□□□□ 0.22
U2af1Q9D883 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
U2af1Q9D883 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Gm13097-201ENSMUST00000210722 397 ntBASIC16.41■□□□□ 0.22
U2af1Q9D883 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.41■□□□□ 0.22
U2af1Q9D883 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.41■□□□□ 0.22
U2af1Q9D883 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
U2af1Q9D883 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
U2af1Q9D883 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
U2af1Q9D883 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 Gm15276-201ENSMUST00000145953 498 ntBASIC16.4■□□□□ 0.22
U2af1Q9D883 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.4■□□□□ 0.22
U2af1Q9D883 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
U2af1Q9D883 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms