Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Stag1Q9D3E6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm24231-201ENSMUST00000104315 133 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm22902-201ENSMUST00000158488 302 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Mir3547-201ENSMUST00000175461 88 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm9230-201ENSMUST00000188228 532 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm37986-201ENSMUST00000193285 383 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Stag1Q9D3E6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.89□□□□□ -0.03
Stag1Q9D3E6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Stag1Q9D3E6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Stag1Q9D3E6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Stag1Q9D3E6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Stag1Q9D3E6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.88□□□□□ -0.03
Stag1Q9D3E6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Stag1Q9D3E6 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Stag1Q9D3E6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Stag1Q9D3E6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms