Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Gm23935-201ENSMUST00000102303 57 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Gm24270-201ENSMUST00000102326 57 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Gm24245-201ENSMUST00000157318 57 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Gm7730-201ENSMUST00000212486 454 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm6736-201ENSMUST00000166583 948 ntBASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm27989-201ENSMUST00000184721 107 ntBASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm43575-201ENSMUST00000196420 516 ntBASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.16□□□□□ -0.78
Hdhd3Q9CYW4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.15□□□□□ -0.78
Hdhd3Q9CYW4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms