Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm7Q9CQQ8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm26361-201ENSMUST00000158868 186 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm7Q9CQQ8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Gm24231-201ENSMUST00000104315 133 ntBASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lsm7Q9CQQ8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms