Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim16Q99PP9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm14660-201ENSMUST00000119809 575 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm25857-201ENSMUST00000082788 129 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.26□□□□□ -0.45
Trim16Q99PP9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim16Q99PP9 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.25□□□□□ -0.45
Trim16Q99PP9 Gm27731-201ENSMUST00000185192 107 ntBASIC12.25□□□□□ -0.45
Trim16Q99PP9 Gm45784-201ENSMUST00000188360 142 ntBASIC12.25□□□□□ -0.45
Trim16Q99PP9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.25□□□□□ -0.45
Trim16Q99PP9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.25□□□□□ -0.45
Trim16Q99PP9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim16Q99PP9 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim16Q99PP9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim16Q99PP9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms