Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.49□□□□□ -0.41
Trim33Q99PP7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gm23931-201ENSMUST00000103842 109 ntBASIC12.49□□□□□ -0.41
Trim33Q99PP7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gm13813-201ENSMUST00000120998 787 ntBASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.49□□□□□ -0.41
Trim33Q99PP7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.49□□□□□ -0.41
Trim33Q99PP7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Snora73a-201ENSMUST00000082453 205 ntBASIC12.49□□□□□ -0.41
Trim33Q99PP7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim33Q99PP7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.48□□□□□ -0.41
Trim33Q99PP7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.48□□□□□ -0.41
Trim33Q99PP7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm14921-201ENSMUST00000118643 908 ntBASIC12.48□□□□□ -0.41
Trim33Q99PP7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm21156-201ENSMUST00000189693 869 ntBASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.48□□□□□ -0.41
Trim33Q99PP7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.48□□□□□ -0.41
Trim33Q99PP7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.48□□□□□ -0.41
Trim33Q99PP7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim33Q99PP7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms