Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.38□□□□□ -0.43
Cdh23Q99PF4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm12036-201ENSMUST00000120008 530 ntBASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm6644-201ENSMUST00000186507 951 ntBASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm29499-201ENSMUST00000189151 486 ntBASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm28329-201ENSMUST00000191208 689 ntBASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Gm29171-201ENSMUST00000191397 486 ntBASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh23Q99PF4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm24809-201ENSMUST00000175318 271 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm24954-201ENSMUST00000178831 110 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm43506-201ENSMUST00000200675 753 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm5714-201ENSMUST00000197343 566 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm35960-201ENSMUST00000202712 767 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh23Q99PF4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm4310-201ENSMUST00000177847 889 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm18801-201ENSMUST00000186616 536 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cdh23Q99PF4 Gm9136-201ENSMUST00000193368 454 ntBASIC12.36□□□□□ -0.43
Cdh23Q99PF4 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms