Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Gm43133-201ENSMUST00000197472 463 ntBASIC12.21□□□□□ -0.45
Msh4Q99MT2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msh4Q99MT2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.21□□□□□ -0.45
Msh4Q99MT2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Msh4Q99MT2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Msh4Q99MT2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Msh4Q99MT2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Msh4Q99MT2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Msh4Q99MT2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Msh4Q99MT2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Msh4Q99MT2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.2□□□□□ -0.46
Msh4Q99MT2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.2□□□□□ -0.46
Msh4Q99MT2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.2□□□□□ -0.46
Msh4Q99MT2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.2□□□□□ -0.46
Msh4Q99MT2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Msh4Q99MT2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gm7809-201ENSMUST00000153199 742 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gm43118-201ENSMUST00000199149 775 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Pck2-205ENSMUST00000226352 2784 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.19□□□□□ -0.46
Msh4Q99MT2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Msh4Q99MT2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Msh4Q99MT2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Msh4Q99MT2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.18□□□□□ -0.46
Msh4Q99MT2 Gm14704-201ENSMUST00000120300 874 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms