Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Daam2-202ENSMUST00000224595 1926 ntBASIC12.98□□□□□ -0.33
Col25a1Q99MQ5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm28388-201ENSMUST00000186262 437 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm10774-201ENSMUST00000188689 204 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm4604-201ENSMUST00000025040 390 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col25a1Q99MQ5 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm25998-201ENSMUST00000175397 53 ntBASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col25a1Q99MQ5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms