Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.18□□□□□ -0.3
Clp1Q99LI9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm14724-201ENSMUST00000118400 537 ntBASIC13.18□□□□□ -0.3
Clp1Q99LI9 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.18□□□□□ -0.3
Clp1Q99LI9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm10774-201ENSMUST00000188689 204 ntBASIC13.18□□□□□ -0.3
Clp1Q99LI9 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Mir7686-201ENSMUST00000200604 57 ntBASIC13.18□□□□□ -0.3
Clp1Q99LI9 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Gm807-202ENSMUST00000224929 408 ntBASIC13.18□□□□□ -0.3
Clp1Q99LI9 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Clp1Q99LI9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm8343-201ENSMUST00000182705 994 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm8100-201ENSMUST00000182906 988 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm2965-201ENSMUST00000198365 343 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.17□□□□□ -0.3
Clp1Q99LI9 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Clp1Q99LI9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.16□□□□□ -0.3
Clp1Q99LI9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Clp1Q99LI9 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms