Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Gm7653-201ENSMUST00000214567 508 ntBASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cstf3Q99LI7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Gm11424-201ENSMUST00000121929 829 ntBASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.1□□□□□ -0.47
Cstf3Q99LI7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cstf3Q99LI7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms